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Where are the rest of the interrupts for any given microcontroller? I find only one timer overflow interrupt but like the ATmega88, there are 3 timers that all have overflow interrupts and all have two compare interrupts.
There are a host of other interrupts like pin change on other ports other than just one.
Is there some additional files that I need to download to have the rest of those unlisted interrupts?

Hello,

You should be able to access the other interrupts using the custom interrupt type. Help can be found on this in the main Flowcode help file which provides examples for AVR devices.