the timer 1/3/5 of the PIC18F25K22 are absolute identical 16bit timers.
But why is the definition of the timers settings in the FCD- file different?
For example:
[TMR1]
....
Opt2="Prescaler Rate"
Opt2Cnt=4
Opt2_1="1:1"
Opt2_1Val="t1con = t1con & 0x0F;\n"
Opt2_2="1:2"
Opt2_2Val="t1con = (t1con & 0x0F) | 0x10;\n"
Opt2_3="1:4"
Opt2_3Val="t1con = (t1con & 0x0F) | 0x20;\n"
Opt2_4="1:8"
Opt2_4Val="t1con = (t1con & 0x0F) | 0x30;\n"
[TMR3]
....
Opt2="Prescaler Rate"
Opt2Cnt=4
Opt2_1="1:1"
Opt2_1Val="t3con = t3con & 0x0F;\n"
Opt2_2="1:2"
Opt2_2Val="t3con = (t3con & 0x0F) | 0x10;\n"
Opt2_3="1:4"
Opt2_3Val="t3con = (t3con & 0x0F) | 0x20;\n"
Opt2_4="1:8"
Opt2_4Val="t3con = (t3con & 0x0F) | 0x30;\n"
[TMR5]
...
Opt2="Prescaler Rate"
Opt2Cnt=4
Opt2_1="1:1"
Opt2_1Val="t5con = t5con & 0xE7;\n"
Opt2_2="1:2"
Opt2_2Val="t5con = (t5con & 0xE7) | 0x08;\n" <--

Opt2_3="1:4"
Opt2_3Val="t5con = (t5con & 0xE7) | 0x10;\n" <---

Opt2_4="1:8"
Opt2_4Val="t5con = (t5con & 0xE7) | 0x18;\n" <-----

Finally, the TMR5 definition is absolute wrong and you mask the wrong bits for the prescaler definition.
Thanks